pFind Studio: a computational solution for mass spectrometry-based proteomics
|
|
Home |
|
|
|
|
Institute of Computing Technology, Beijing, China
|
What's new
We are now beta testing pFind Studio 2.4.1 including
pFind 2.4.0.2,
pBuild 2.0.0.3,
pLabel 2.0.0.2,
pXtract 1.0.0.2
and pScan. You can see its new features and download.
Our newest work on open spectral library search was presented on the 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB2010), one of the two top conferences in bioinformatics. See our publications ... Our work on the parallel version of pFind was pubulished on the Journal of Rapid Communications in Mass Spectrometry. Software
pFind pFind is a search engine for peptide and protein identification via tandem mass spectrometry. [more...] pXtract pXtract creates .DTA .MGF and .MS2 input files directly from Thermo Scientific .raw LC-MS/MS data files. [more...] pScan pScan is a flexible tool that helps biologists to preprocess protein sequence databases in proteomics research. [more...] pBuild pBuild is a tool that can compare several search engines' results and combine them together. The latest version, pBuild v2.0, can process the search results of pFind, SEQUEST and Mascot. [more...] pLabel pLabel is a spectra labeling tool that can visualize the global- and local-view peptide-spectrum matches, given the results of pFind or any other search engines. pLabel can label both CID and ETD spectra, and implement the manual de novo sequencing. [more...] pCluster pCluster is a software tool aiming at detecting protein modifications independent of sequence databases by tandem mass spectral clustering. |
|
