pFind Studio: a computational solution for mass spectrometry-based proteomics

 

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Institute of Computing Technology,

Chinese Academy of Sciences,

Beijing, China

 

 

pFind

pFind is a search engine for peptide and protein identification via tandem mass spectrometry...

pScan

pScan is a flexible tool that helps biologists to preprocess protein sequence databases in proteomics research. ...

pIndex

pIndex is a tool that helps pFind build the indexes of protein databases in FASTA file before the search. It can significantly accelerate pFind’s search processes...

pBuild

pBuild is a tool that can compare several search engines' results and combine them together. The latest version, pBuild v2.0, can process the search results of pFind, SEQUEST and Mascot...

pLabel

pLabel is a spectra labeling tool that can visualize the global- and local-view peptide-spectrum matches, given the results of pFind or any other search engines. pLabel can label both CID and ETD spectra, and implement the manual de novo sequencing...

pQMass

pQMass is a flexible tool that helps biologists to preprocess MS/MS data and improve the quality of MS/MS data by denoising and predicting the systematic measurement errors, which globally optimizes the use of spectral data...

Other Tools

 

Software downloading for public use will soon be available.